close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72757.1Proteasome accessory factor PafA2; KEGG: cga:Celgi_1839 4.8e-113 hypothetical protein; K13571 proteasome accessory factor A. (516 aa)    
Predicted Functional Partners:
arc
Proteasome ATPase; KEGG: iva:Isova_1446 4.0e-102 proteasome ATPase K13527; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.976
KWZ72759.1
tRNA methyltransferase complex GCD14 subunit; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
 
    0.873
pafA
Proteasome accessory factor PafA; KEGG: bcv:Bcav_2237 1.2e-111 hypothetical protein; K13571 proteasome accessory factor A; Psort location: Cytoplasmic, score: 7.50.
 
    
0.859
KWZ72756.1
Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family.
       0.773
KWZ72760.1
Hypothetical protein; KEGG: mmh:Mmah_1050 4.1e-19 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 7.50.
 
     0.756
KWZ72104.1
mIHF protein; KEGG: cmi:CMM_1780 3.1e-09 gmkA; guanylate kinase K00942; Psort location: Cytoplasmic, score: 7.50.
  
    0.658
KWZ72888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.620
KWZ72754.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: bcv:Bcav_2236 1.2e-31 FKBP-type peptidylprolyl isomerase; K01802 peptidylprolyl isomerase; Psort location: Cytoplasmic, score: 7.50.
       0.613
KWZ74203.1
Cyclic nucleotide-binding domain protein; KEGG: bde:BDP_1802 8.2e-47 Crp family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
    0.479
KWZ72117.1
KEGG: cfi:Celf_1950 1.7e-195 DEAD/DEAH box helicase domain-containing protein; K03727 ATP-dependent RNA helicase HelY; Psort location: Cytoplasmic, score: 7.50.
 
     0.476
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.