STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72760.1Hypothetical protein; KEGG: mmh:Mmah_1050 4.1e-19 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 7.50. (270 aa)    
Predicted Functional Partners:
pcrA
KEGG: cfi:Celf_1107 5.1e-228 ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
  
   0.904
pafA
Proteasome accessory factor PafA; KEGG: bcv:Bcav_2237 1.2e-111 hypothetical protein; K13571 proteasome accessory factor A; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.760
KWZ72757.1
Proteasome accessory factor PafA2; KEGG: cga:Celgi_1839 4.8e-113 hypothetical protein; K13571 proteasome accessory factor A.
 
   
 0.755
KWZ72060.1
KEGG: cfi:Celf_2039 1.1e-44 lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.682
arc
Proteasome ATPase; KEGG: iva:Isova_1446 4.0e-102 proteasome ATPase K13527; Psort location: CytoplasmicMembrane, score: 8.78.
       0.643
KWZ72759.1
tRNA methyltransferase complex GCD14 subunit; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.643
KWZ74942.1
HRDC domain protein; KEGG: xce:Xcel_0786 8.9e-192 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
  
   0.636
KWZ72756.1
Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family.
       0.540
whiB-4
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.529
KWZ72061.1
Putative GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase; KEGG: cfi:Celf_2038 4.0e-102 group 1 glycosyl transferase; K08256 phosphatidylinositol alpha-mannosyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.521
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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