STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72770.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
KWZ72768.1
Hypothetical protein; KEGG: sen:SACE_6661 1.4e-49 DNA-directed DNA polymerase K14161; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.992
dnaE2
DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
 
  
 0.947
dinB
ImpB/MucB/SamB family protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
  
  
 0.742
KWZ72767.1
Protein, SNF2 family; KEGG: mph:MLP_35040 1.9e-132 putative helicase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.705
KWZ72769.1
Hypothetical protein; KEGG: fal:FRAAL2179 7.9e-09 DNA-directed DNA polymerase K00961; Psort location: CytoplasmicMembrane, score: 9.55.
       0.705
KWZ72771.1
Raf-like protein; Psort location: Cytoplasmic, score: 9.67.
       0.583
sbcD
Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
      
 0.565
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.509
KWZ73034.1
Hypothetical protein.
  
     0.452
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
   
  
 0.444
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.