STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufBKEGG: suc:ECTR2_773 6.8e-162 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50. (492 aa)    
Predicted Functional Partners:
sufC
KEGG: bbp:BBPR_0814 3.6e-92 sufC; FeS assembly protein SufC K09013; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
KWZ72700.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.998
KWZ72699.1
SUF system FeS assembly protein, NifU family.
 
  
 0.981
KWZ72705.1
Hypothetical protein; KEGG: ctt:CtCNB1_2836 0.0054 SOS-response transcriptional repressor, LexA; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50.
  
    0.956
KWZ72698.1
Hypothetical protein; KEGG: bqy:MUS_1155 2.5e-13 yitW; serine O-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.924
sufD
FeS assembly protein SufD; KEGG: apb:SAR116_0016 2.8e-29 Fe-S center production/stability protein SufD K09015; Psort location: Cytoplasmic, score: 7.50.
 
   
0.919
KWZ72702.1
Putative 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit; KEGG: mcu:HMPREF0573_11880 1.5e-13 nirD; putative nitrite reductase (NAD(P)H) small subunit K05710; Psort location: Cytoplasmic, score: 7.50.
       0.837
KWZ72706.1
Hydrolase, NUDIX family; KEGG: mcu:HMPREF0573_11884 7.4e-46 nudF; putative ADP-ribose diphosphatase K01515; Psort location: Cytoplasmic, score: 7.50.
       0.655
KWZ72710.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
       0.644
KWZ72708.1
Putative integral membrane protein MviN; KEGG: pfe:PSF113_5043 6.3e-17 murJ; protein MurJ K03980; Psort location: CytoplasmicMembrane, score: 10.00.
       0.643
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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