STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72705.1Hypothetical protein; KEGG: ctt:CtCNB1_2836 0.0054 SOS-response transcriptional repressor, LexA; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. (245 aa)    
Predicted Functional Partners:
sufB
KEGG: suc:ECTR2_773 6.8e-162 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50.
  
    0.956
KWZ72699.1
SUF system FeS assembly protein, NifU family.
  
  
 0.860
sufD
FeS assembly protein SufD; KEGG: apb:SAR116_0016 2.8e-29 Fe-S center production/stability protein SufD K09015; Psort location: Cytoplasmic, score: 7.50.
  
    0.857
sufC
KEGG: bbp:BBPR_0814 3.6e-92 sufC; FeS assembly protein SufC K09013; Psort location: Cytoplasmic, score: 9.97.
  
    0.826
KWZ72702.1
Putative 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit; KEGG: mcu:HMPREF0573_11880 1.5e-13 nirD; putative nitrite reductase (NAD(P)H) small subunit K05710; Psort location: Cytoplasmic, score: 7.50.
       0.820
KWZ72700.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.817
KWZ72698.1
Hypothetical protein; KEGG: bqy:MUS_1155 2.5e-13 yitW; serine O-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.780
KWZ72710.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
 
     0.690
KWZ75651.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
    
   0.679
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.679
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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