STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KWZ72408.1Putative ribulokinase; KEGG: pak:HMPREF0675_5399 8.9e-192 FGGY-family pentulose kinase; Psort location: Cytoplasmic, score: 9.67. (520 aa)    
Predicted Functional Partners:
KWZ72409.1
KEGG: paz:TIA2EST2_11295 8.1e-127 3-dehydroquinate synthase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)]; Psort location: Cytoplasmic, score: 7.50.
 
    0.961
KWZ72406.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.882
KWZ74666.1
3-dehydroquinate synthase; KEGG: pav:TIA2EST22_11490 1.9e-125 3-dehydroquinate synthase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)]; Psort location: Cytoplasmic, score: 7.50.
 
    0.843
KWZ72407.1
KEGG: gth:Geoth_2993 4.3e-34 HAD-superfamily hydrolase; Psort location: Cytoplasmic, score: 7.50.
 
    0.840
rpe
KEGG: bcv:Bcav_2050 1.7e-76 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 7.50.
 
      0.773
xylA
Xylose isomerase; KEGG: bad:BAD_0422 6.7e-187 xylA; xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.97; Belongs to the xylose isomerase family.
     
 0.628
KWZ72410.1
Hypothetical protein; KEGG: apb:SAR116_2179 1.5e-15 permease K07090; Psort location: CytoplasmicMembrane, score: 10.00.
       0.531
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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