STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72412.1Transcriptional regulator, IclR family protein; KEGG: cnc:CNE_2c21920 4.8e-19 yddV; diguanylate cyclase YddV; Psort location: Cytoplasmic, score: 7.50. (253 aa)    
Predicted Functional Partners:
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
  
 0.746
KWZ72888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.733
leuD
3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
  
    0.673
KWZ72411.1
Glycosyltransferase, group 1 family protein; KEGG: req:REQ_28150 8.3e-102 glycosyl transferase family 1; K13668 phosphatidylinositol alpha-1,6-mannosyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.664
KWZ74688.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.553
KWZ72076.1
histidine--tRNA ligase; KEGG: xce:Xcel_1680 1.2e-139 histidyl-tRNA synthetase K01892; Psort location: Cytoplasmic, score: 10.00.
  
     0.493
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.492
KWZ74931.1
Hypothetical protein.
  
     0.466
KWZ72757.1
Proteasome accessory factor PafA2; KEGG: cga:Celgi_1839 4.8e-113 hypothetical protein; K13571 proteasome accessory factor A.
  
     0.444
KWZ74369.1
IclR helix-turn-helix protein; KEGG: pfe:PSF113_1336 1.4e-19 pcaR; protein PcaR K02624; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.438
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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