STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpsANAD-dependent glycerol-3-phosphate dehydrogenase [NAD(P)+ ] protein; KEGG: kse:Ksed_10760 6.4e-63 glycerol-3-phosphate dehydrogenase K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (301 aa)    
Predicted Functional Partners:
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
  
 0.890
cysE
KEGG: bcv:Bcav_2610 2.4e-56 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
    
 0.690
ddl-2
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
     
 0.644
KWZ74957.1
MaoC-like protein; KEGG: cef:CE0913 0. fasA; fatty-acid synthase I K11533; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.632
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
      0.580
KWZ72421.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.570
KWZ72860.1
Isochorismatase family protein; KEGG: cfi:Celf_3076 5.6e-64 isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase; Psort location: Cytoplasmic, score: 9.97.
  
   0.557
KWZ72201.1
Hypothetical protein; KEGG: bmj:BMULJ_04433 1.9e-08 isochorismatase; Psort location: Cytoplasmic, score: 7.50.
  
   0.557
KWZ72509.1
Acetyltransferase, GNAT family; KEGG: ase:ACPL_7199 6.8e-20 yuaI-like N-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
    
   0.552
KWZ72418.1
Hypothetical protein.
       0.540
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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