STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72433.1Peptidase family M13; KEGG: cga:Celgi_2193 2.2e-165 Neprilysin; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 9.97. (655 aa)    
Predicted Functional Partners:
pepN
Membrane alanyl aminopeptidase; KEGG: ske:Sked_24580 1.9e-228 aminopeptidase N; K01256 aminopeptidase N; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.740
KWZ72434.1
Hypothetical protein; KEGG: sco:SCO3542 9.8e-05 SCH5.05c; integral membrane protein with kinase activity; K00943 dTMP kinase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.661
cysE
KEGG: bcv:Bcav_2610 2.4e-56 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
       0.661
truA
Putative tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
      0.640
cysK
KEGG: cfl:Cfla_1390 2.4e-104 cysteine synthase; K01738 cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
    0.554
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.514
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
   
    0.424
pepN-2
KEGG: rha:RHA1_ro01938 2.8e-140 membrane alanyl aminopeptidase K01256; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.412
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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