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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72437.1YigZ family protein; KEGG: ssr:SALIVB_0364 2.1e-32 Xaa-Pro dipeptidase; Psort location: Cytoplasmic, score: 7.50. (222 aa)    
Predicted Functional Partners:
KWZ75169.1
S4 domain protein; KEGG: apb:SAR116_1073 5.2e-13 heat shock protein K04762; Psort location: Cytoplasmic, score: 7.50.
     
 0.669
cysK
KEGG: cfl:Cfla_1390 2.4e-104 cysteine synthase; K01738 cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
   0.582
rpmF
Ribosomal protein L32; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL32 family.
       0.530
cysE
KEGG: bcv:Bcav_2610 2.4e-56 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
       0.454
KWZ72439.1
Hypothetical protein.
       0.414
KWZ72434.1
Hypothetical protein; KEGG: sco:SCO3542 9.8e-05 SCH5.05c; integral membrane protein with kinase activity; K00943 dTMP kinase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.406
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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