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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72442.1KEGG: efc:EFAU004_00424 1.3e-06 ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00. (403 aa)    
Predicted Functional Partners:
KWZ72443.1
Putative lipoprotein releasing system, ATP-binding protein; KEGG: bbp:BBPR_0795 3.8e-49 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.967
KWZ74754.1
ABC transporter, ATP-binding protein; KEGG: taz:TREAZ_2826 1.7e-78 macrolide export ATP-binding/permease MacB 1/2 K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.924
KWZ75022.1
ABC transporter, ATP-binding protein; KEGG: bju:BJ6T_61710 2.8e-62 hypothetical protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 0.874
KWZ72441.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.823
KWZ74756.1
Efflux ABC transporter, permease protein; KEGG: ccm:Ccan_09570 2.1e-11 Macrolide export ATP-binding/permease macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.822
KWZ74757.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.817
KWZ74758.1
Hypothetical protein.
 
    0.802
KWZ74759.1
FTR1 family protein; KEGG: ccv:CCV52592_0433 8.3e-54 fumarate hydratase class II K01679; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.795
KWZ74753.1
Hypothetical protein; KEGG: ase:ACPL_6991 0.0061 Zinc metalloprotease zmpB.
 
     0.774
KWZ74755.1
Efflux ABC transporter, permease protein; KEGG: cli:Clim_1944 8.7e-18 ABC transporter; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.773
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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