STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72448.1KEGG: bfa:Bfae_08030 2.4e-86 cystathionine beta-lyase/cystathionine gamma-synthase; K01760 cystathionine beta-lyase; Psort location: Cytoplasmic, score: 9.97. (389 aa)    
Predicted Functional Partners:
cysK
KEGG: cfl:Cfla_1390 2.4e-104 cysteine synthase; K01738 cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.802
KWZ72447.1
ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A6491 6.9e-50 amino acid ABC transporter substrate-binding protein K02424; Belongs to the bacterial solute-binding protein 3 family.
  
    0.776
KWZ72445.1
Putative glutamate ABC transporter, ATP-binding protein GluA; KEGG: ahe:Arch_1152 4.5e-62 ABC transporter; K10010 cystine transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
  
    0.773
KWZ72446.1
KEGG: hpa:HPAG1_0922 5.3e-36 amino acid ABC transporter, permease protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.771
KWZ74336.1
KEGG: ske:Sked_00590 1.9e-54 5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH); Psort location: Cytoplasmic, score: 7.50.
  
 
 0.652
rplL
Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
   0.626
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.569
KWZ74337.1
Putative 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
  
 0.440
KWZ73911.1
Methionine synthase, vitamin-B12 independent; KEGG: teq:TEQUI_0936 5.3e-162 epoxyalkane:coenzyme M transferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.440
KWZ72397.1
Aminotransferase, class I/II; KEGG: mcu:HMPREF0573_10336 3.0e-72 putative cystathionine beta-lyase; K14155 cystathione beta-lyase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.418
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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