STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72456.1Putative transcriptional regulatory protein PrrA; KEGG: rha:RHA1_ro04741 2.1e-55 phoP; response regulator, two-component system K02483; Psort location: Cytoplasmic, score: 9.97. (244 aa)    
Predicted Functional Partners:
KWZ72457.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mjl:Mjls_3940 1.6e-68 integral membrane sensor signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 9.68.
 
   0.972
KWZ75006.1
Putative signal-transduction histidine kinase senX3; KEGG: aai:AARI_05260 4.1e-84 signal transduction histidine kinase K07768; Psort location: CytoplasmicMembrane, score: 8.78.
   0.897
KWZ72054.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cul:CULC22_00236 4.9e-33 tcsS1; two-component system sensor kinase protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.886
KWZ73153.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcv:Bcav_0839 1.6e-98 histidine kinase K02484; Psort location: CytoplasmicMembrane, score: 9.96.
   0.885
KWZ73039.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10409 3.9e-111 histidine kinase K07654; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.842
KWZ74835.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aai:AARI_02120 3.8e-49 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
   0.819
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.639
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.622
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.621
KWZ73090.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rer:RER_21360 6.2e-49 two-component histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
 
   0.609
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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