STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72459.1KEGG: apb:SAR116_2479 2.9e-10 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00. (405 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.773
KWZ74858.1
Septum formation initiator; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.516
KWZ75194.1
KEGG: efc:EFAU004_01297 1.1e-19 HAD superfamily hydrolase K07024.
  
     0.508
KWZ75013.1
MMPL family protein; KEGG: tpr:Tpau_4044 1.6e-114 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.480
KWZ73109.1
Basic membrane protein.
  
     0.447
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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