STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hisA1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: bad:BAD_1124 6.0e-67 hisA; phosphoribosyl isomerase A K01814; Psort location: Cytoplasmic, score: 9.67. (237 aa)    
Predicted Functional Partners:
KWZ72561.1
KEGG: cfl:Cfla_1616 2.6e-27 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; K02501 glutamine amidotransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.990
hisC
Histidinol-phosphate transaminase; KEGG: ksk:KSE_40050 1.1e-72 pat; putative phenylalanine aminotransferase; K00817 histidinol-phosphate aminotransferase; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
  
 0.955
KWZ72560.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.822
KWZ72563.1
Hypothetical protein.
       0.822
trpC
KEGG: ssx:SACTE_1463 5.4e-82 Indole-3-glycerol-phosphate synthase K01609; Psort location: Cytoplasmic, score: 7.50; Belongs to the TrpC family.
 
 
 0.789
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
    
 0.712
KWZ74792.1
HAD hydrolase, family IB; KEGG: crd:CRES_1952 2.3e-42 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.711
KWZ72559.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; KEGG: ctu:CTU_37370 1.9e-10 gltP; glutamate/aspartate:proton symporter K11102; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.668
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.650
KWZ73909.1
KEGG: bcv:Bcav_1417 6.9e-114 3-isopropylmalate dehydrogenase K00052; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.646
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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