STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72585.1Histidine kinase; KEGG: sro:Sros_3523 1.7e-62 histidine kinase; Psort location: Cytoplasmic, score: 7.50. (554 aa)    
Predicted Functional Partners:
KWZ72584.1
Response regulator receiver domain protein; KEGG: npu:Npun_R2420 9.4e-30 LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
  0.984
cydC
Thiol reductant ABC exporter, CydC subunit; KEGG: iva:Isova_2078 6.2e-113 cysteine ABC transporter permease/ATP-binding protein CydC K16012; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.899
cydD
Thiol reductant ABC exporter, CydD subunit; KEGG: iva:Isova_2077 4.4e-119 cysteine ABC transporter permease/ATP-binding protein CydD K16013; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.876
KWZ74936.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.659
KWZ74176.1
Transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.97.
 
   0.620
KWZ75261.1
Response regulator receiver domain protein; KEGG: ase:ACPL_6608 1.0e-39 Sensor protein vraS; Psort location: Cytoplasmic, score: 9.97.
 
   0.611
KWZ72877.1
Hypothetical protein; KEGG: tra:Trad_1785 3.3e-27 NAD(P)H dehydrogenase (quinone); K00230 menaquinone-dependent protoporphyrinogen oxidase; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.601
KWZ73273.1
Putative oxygen regulatory protein NreC; KEGG: bde:BDP_0499 5.3e-59 two-component response regulator; Psort location: Cytoplasmic, score: 9.97.
 
   0.585
cydB
KEGG: mcu:HMPREF0573_11824 6.0e-99 cydB; cytochrome bd ubiquinol oxidase subunit II K00426; Psort location: CytoplasmicMembrane, score: 10.00.
       0.577
KWZ75038.1
Response regulator receiver domain protein; KEGG: fal:FRAAL4813 5.2e-45 two-component system response regulator K07693; Psort location: Cytoplasmic, score: 9.97.
 
   0.571
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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