Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72603.1L-asparaginase, type I; KEGG: bde:BDP_0059 5.1e-102 L-asparaginase K01424; Psort location: Cytoplasmic, score: 9.67. (330 aa)    
Predicted Functional Partners:
KWZ72602.1
KEGG: eci:UTI89_C0120 1.8e-81 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.822
aspA-2
Aspartate ammonia-lyase; KEGG: pfr:PFREUD_16330 1.3e-181 aspA2; aspartate ammonia-lyase K01744; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.616
KWZ72601.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.615
KWZ72600.1
SCP-like protein; KEGG: dan:Dana_GF13333 1.9e-12 GF13333 gene product from transcript GF13333-RA; K00907 myosin-light-chain kinase; Psort location: Cytoplasmic, score: 7.50.
   
   0.479
KWZ72604.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.412
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
    0.401
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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