Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KWZ72602.1 | KWZ72603.1 | HMPREF3198_01961 | HMPREF3198_01962 | KEGG: eci:UTI89_C0120 1.8e-81 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00. | L-asparaginase, type I; KEGG: bde:BDP_0059 5.1e-102 L-asparaginase K01424; Psort location: Cytoplasmic, score: 9.67. | 0.849 |
KWZ72602.1 | KWZ72604.1 | HMPREF3198_01961 | HMPREF3198_01963 | KEGG: eci:UTI89_C0120 1.8e-81 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.412 |
KWZ72603.1 | KWZ72602.1 | HMPREF3198_01962 | HMPREF3198_01961 | L-asparaginase, type I; KEGG: bde:BDP_0059 5.1e-102 L-asparaginase K01424; Psort location: Cytoplasmic, score: 9.67. | KEGG: eci:UTI89_C0120 1.8e-81 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00. | 0.849 |
KWZ72603.1 | KWZ72604.1 | HMPREF3198_01962 | HMPREF3198_01963 | L-asparaginase, type I; KEGG: bde:BDP_0059 5.1e-102 L-asparaginase K01424; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.412 |
KWZ72604.1 | KWZ72602.1 | HMPREF3198_01963 | HMPREF3198_01961 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | KEGG: eci:UTI89_C0120 1.8e-81 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00. | 0.412 |
KWZ72604.1 | KWZ72603.1 | HMPREF3198_01963 | HMPREF3198_01962 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | L-asparaginase, type I; KEGG: bde:BDP_0059 5.1e-102 L-asparaginase K01424; Psort location: Cytoplasmic, score: 9.67. | 0.412 |