STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72613.1Hypothetical protein; KEGG: cnc:CNE_2c15860 9.6e-05 catC; muconolactone delta-isomerase CatC K09780. (108 aa)    
Predicted Functional Partners:
KWZ72612.1
Hypothetical protein.
 
    
0.805
KWZ72611.1
Sodium/bile acid symporter family protein; KEGG: sbu:SpiBuddy_3010 5.1e-05 Tagaturonate reductase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.797
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.543
KWZ73179.1
Hypothetical protein.
  
     0.525
KWZ73019.1
Hypothetical protein; KEGG: aai:AARI_12340 3.4e-41 lipase/esterase.
  
     0.505
KWZ74915.1
Phosphotransferase enzyme family protein; KEGG: scl:sce2725 2.1e-11 phosphotransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.452
KWZ72610.1
Putative prolyl aminopeptidase; KEGG: cva:CVAR_0351 1.4e-69 pipB; proline imino-peptidase; Psort location: Cytoplasmic, score: 9.67.
  
    0.446
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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