STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KWZ72634.1ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (258 aa)    
Predicted Functional Partners:
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.999
smc
Putative segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.940
KWZ72633.1
Putative sporulation initiation inhibitor protein Soj; KEGG: sen:SACE_5241 1.1e-85 chromosome partitioning protein K03496; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.930
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
  
  
 0.912
KWZ72636.1
Pseudouridylate synthase; KEGG: iva:Isova_1502 2.7e-71 pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.901
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.661
KWZ72637.1
KEGG: bcv:Bcav_2151 3.3e-82 prephenate dehydrogenase; K04517 prephenate dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
       0.617
KWZ75497.1
Phage tail tape measure protein, TP901 family; KEGG: epr:EPYR_02197 1.8e-20 SPBc2 prophage-derived uncharacterized transglycosylase yomI.
  
 
 0.587
KWZ75312.1
Hypothetical protein; KEGG: tel:tlr2432 0.00015 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.587
KWZ73950.1
KEGG: ava:Ava_1781 3.7e-13 hypothetical protein; K01317 acrosin; Psort location: Cellwall, score: 9.20.
  
 
 0.587
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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