STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72643.1DJ-1/PfpI family protein; KEGG: mdi:METDI5414 4.1e-20 inh; ThiJ/PfpI family isonitrile hydratase. (197 aa)    
Predicted Functional Partners:
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.725
KWZ72644.1
Hypothetical protein.
       0.501
KWZ72645.1
KEGG: gvg:HMPREF0421_20687 7.5e-69 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
       0.501
KWZ72646.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 3.1e-15 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
       0.501
KWZ72647.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 3.7e-11 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
       0.501
lexA
Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
   
   0.447
KWZ74744.1
Acetyltransferase, GNAT family; KEGG: pfr:PFREUD_07030 1.4e-19 N-acetyltransferase GCN5.
  
    0.404
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.