STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72188.1Base excision DNA repair protein, HhH-GPD family; KEGG: mcu:HMPREF0573_10575 4.6e-53 pyrimidine dimer deoxyribonuclease K07457; Psort location: Cytoplasmic, score: 7.50. (215 aa)    
Predicted Functional Partners:
KWZ72189.1
Hypothetical protein.
       0.524
KWZ72190.1
BCCT family transporter; KEGG: mct:MCR_0468 6.3e-56 choline/glycine betaine transporter K02168; Psort location: CytoplasmicMembrane, score: 10.00.
       0.524
KWZ72187.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: isc:IscW_ISCW000348 5.7e-08 secreted mucin MUC17, putative; Psort location: Cellwall, score: 9.97.
  
    0.499
KWZ72191.1
Putative Mrr restriction system protein; KEGG: mad:HP15_3643 4.9e-05 restriction endonuclease; Psort location: Cytoplasmic, score: 7.50.
       0.423
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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