Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72198.1TIGR02687 family protein; Psort location: Cytoplasmic, score: 7.50. (845 aa)    
Predicted Functional Partners:
KWZ72197.1
Hypothetical protein; KEGG: mma:MM_0156 1.0e-149 type IIS restriction enzyme K01155; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.958
KWZ72199.1
TIGR02688 family protein; KEGG: dvg:Deval_1299 2.9e-186 hypothetical protein; K01338 ATP-dependent Lon protease; Psort location: Cytoplasmic, score: 7.50.
 
     0.958
brxC
Hypothetical protein; KEGG: isc:IscW_ISCW022794 0.0011 hyaluronan mediated motility receptor, putative.
 
    0.928
KWZ72195.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.919
KWZ72465.1
KEGG: cga:Celgi_2121 4.3e-41 Nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NDK family.
  
 0.809
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
   
 0.797
KWZ74410.1
Helicase protein; KEGG: ffo:FFONT_1369 4.6e-17 DEAD/DEAH box helicase; K03726 helicase.
    
  0.774
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
   0.760
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.757
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
   0.757
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.