STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72212.1ROK family protein; KEGG: ret:RHE_CH01552 2.4e-33 ROK family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97. (384 aa)    
Predicted Functional Partners:
KWZ72209.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 4.6e-08 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: Extracellular, score: 9.13.
 
    0.768
KWZ74354.1
ROK family protein; KEGG: apv:Apar_0928 1.6e-64 ROK family protein; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.97.
  
     0.760
KWZ74123.1
ROK family protein; KEGG: rcp:RCAP_rcc00019 2.0e-29 xylR; xylose operon repressor; Psort location: Cytoplasmic, score: 7.50.
  
     0.740
KWZ74390.1
ROK family protein; KEGG: bde:BDP_0576 2.7e-48 NagC/XylR-type transciptional regulator; Psort location: Cytoplasmic, score: 9.95.
  
     0.730
KWZ72213.1
Hypothetical protein.
       0.718
KWZ72208.1
Alpha-galactosidase; KEGG: mrb:Mrub_2812 8.7e-91 glycoside hydrolase clan GH-D; K07407 alpha-galactosidase; Psort location: Cytoplasmic, score: 7.50.
 
     0.681
KWZ74651.1
ROK family protein; KEGG: bde:BDP_2227 1.0e-19 transcriptional repressor, ROK family; Psort location: Cytoplasmic, score: 7.50.
  
    0.661
KWZ72210.1
ABC transporter, permease protein; KEGG: tex:Teth514_2199 5.7e-39 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.603
KWZ72211.1
KEGG: scl:sce9265 3.9e-40 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.598
KWZ72431.1
Phosphotransferase system, EIIC; KEGG: paw:PAZ_c07180 3.3e-98 nagE; PTS system N-acetylglucosamine-specific transporter subunit IICBA; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.555
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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