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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsK-2Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (299 aa)    
Predicted Functional Partners:
deoC-2
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
  0.956
KWZ72218.1
Hypothetical protein; KEGG: rsq:Rsph17025_3351 6.7e-52 monosaccharide-transporting ATPase K10820; Psort location: Cytoplasmic, score: 7.50.
 
     0.931
fucP-2
L-fucose:H+ symporter permease; KEGG: gdj:Gdia_1396 3.2e-19 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.849
KWZ72631.1
Transketolase; KEGG: mcu:HMPREF0573_11615 3.9e-237 tkt; transketolase K00615; Psort location: Cytoplasmic, score: 7.50; Belongs to the transketolase family.
   
 0.804
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.799
KWZ74478.1
KEGG: ahe:Arch_0131 5.2e-219 phosphoglucomutase, alpha-D-glucose phosphate-specific; K01835 phosphoglucomutase; Psort location: Cytoplasmic, score: 7.50.
     
 0.781
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.778
KWZ73012.1
KEGG: mcu:HMPREF0573_11182 3.0e-49 ribose-5-phosphate isomerase B K01808; Psort location: Cytoplasmic, score: 7.50.
  
 
  0.766
KWZ72405.1
Ribose 5-phosphate isomerase; KEGG: paz:TIA2EST2_11315 3.2e-52 putative ribose 5-phosphate isomerase; K01808 ribose 5-phosphate isomerase B; Psort location: Cytoplasmic, score: 7.50.
  
 
  0.766
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.747
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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