STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72082.1Sua5/YciO/YrdC/YwlC family protein; KEGG: ova:OBV_22440 1.6e-14 coaE; dephospho-CoA kinase K07566; Psort location: Cytoplasmic, score: 7.50; Belongs to the SUA5 family. (206 aa)    
Predicted Functional Partners:
aspS
aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
 
     0.802
KWZ72080.1
Transporter, major facilitator family protein; KEGG: ase:ACPL_7379 3.5e-17 EmrB/QacA subfamily drug resistance transporter; Psort location: CytoplasmicMembrane, score: 10.00.
       0.550
KWZ72079.1
Putative cold-shock DEAD-box protein A; KEGG: ahe:Arch_0835 3.6e-156 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97.
  
    0.540
KWZ72084.1
ATPase, AAA family; KEGG: mcu:HMPREF0573_11731 3.4e-135 crossover junction endodeoxyribonuclease ATPase K07478; Psort location: Cytoplasmic, score: 7.50.
       0.513
KWZ72083.1
Transporter, betaine/carnitine/choline family; KEGG: shn:Shewana3_2719 1.8e-115 choline/carnitine/betaine transporter K02168; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the BCCT transporter (TC 2.A.15) family.
  
    0.493
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
    0.473
KWZ72636.1
Pseudouridylate synthase; KEGG: iva:Isova_1502 2.7e-71 pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family.
 
  
 0.456
KWZ75035.1
Methyltransferase, HemK family; KEGG: cro:ROD_18011 4.6e-15 hemK; protein methyltransferase hemk (protein-glutamine N methyltransferase) K02493; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the methyltransferase superfamily.
 
  
 0.424
KWZ72091.1
KEGG: iva:Isova_1625 2.4e-47 shikimate dehydrogenase; K00014 shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
  
  
 0.421
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
  
 0.419
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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