STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mltGYceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (404 aa)    
Predicted Functional Partners:
KWZ72091.1
KEGG: iva:Isova_1625 2.4e-47 shikimate dehydrogenase; K00014 shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
  
    0.918
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.876
KWZ72089.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.843
KWZ74197.1
Transglycosylase; KEGG: iva:Isova_2701 2.4e-136 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.51.
  
   
 0.718
KWZ72086.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.634
KWZ72095.1
Shikimate kinase; KEGG: tfu:Tfu_1091 1.1e-19 aroK; shikimate kinase K00891; Psort location: Cytoplasmic, score: 7.50.
 
     0.613
KWZ74679.1
Transglycosylase; KEGG: ahe:Arch_1803 1.7e-146 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.99.
  
   
 0.578
KWZ72084.1
ATPase, AAA family; KEGG: mcu:HMPREF0573_11731 3.4e-135 crossover junction endodeoxyribonuclease ATPase K07478; Psort location: Cytoplasmic, score: 7.50.
 
    0.577
argS
arginine--tRNA ligase; KEGG: ahe:Arch_0351 4.7e-202 arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.556
folP
KEGG: cms:CMS_0101 8.4e-61 dihydropteroate synthase; K00796 dihydropteroate synthase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.555
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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