STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72117.1KEGG: cfi:Celf_1950 1.7e-195 DEAD/DEAH box helicase domain-containing protein; K03727 ATP-dependent RNA helicase HelY; Psort location: Cytoplasmic, score: 7.50. (891 aa)    
Predicted Functional Partners:
KWZ72119.1
Glycosyltransferase, group 2 family protein; KEGG: bcv:Bcav_2065 3.4e-57 dolichyl-phosphate beta-D-mannosyltransferase K00721.
 
     0.845
KWZ72115.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.827
KWZ72114.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.826
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.825
KWZ72116.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.773
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.540
KWZ72113.1
Hypothetical protein.
       0.526
arc
Proteasome ATPase; KEGG: iva:Isova_1446 4.0e-102 proteasome ATPase K13527; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.511
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.498
pafA
Proteasome accessory factor PafA; KEGG: bcv:Bcav_2237 1.2e-111 hypothetical protein; K13571 proteasome accessory factor A; Psort location: Cytoplasmic, score: 7.50.
 
     0.453
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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