STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pepN-2KEGG: rha:RHA1_ro01938 2.8e-140 membrane alanyl aminopeptidase K01256; Psort location: Cytoplasmic, score: 9.97. (814 aa)    
Predicted Functional Partners:
KWZ72128.1
Transporter, CPA2 family; KEGG: sun:SUN_2183 1.3e-13 cation-translocating ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KWZ74907.1
Aminopeptidase P domain protein; KEGG: ahe:Arch_1237 1.2e-171 peptidase M24; K01262 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 9.97; Belongs to the peptidase M24B family.
 
 
 0.634
KWZ72126.1
Oxoglutarate dehydrogenase inhibitor; KEGG: bde:BDP_0043 1.6e-09 FHA domain containing protein; Psort location: Cytoplasmic, score: 7.50.
       0.615
KWZ72125.1
Transcriptional regulator, MerR family; Psort location: Cytoplasmic, score: 7.50.
       0.610
kgd
KEGG: bcv:Bcav_1274 0. kgd; alpha-ketoglutarate decarboxylase; K00164 2-oxoglutarate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
   
   0.605
KWZ72129.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.555
KWZ72130.1
KEGG: bcv:Bcav_1962 4.9e-88 3'-5' exonuclease; K03684 ribonuclease D; Psort location: Cytoplasmic, score: 9.97.
  
    0.555
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.527
KWZ72124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.516
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
   
 
 0.464
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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