STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72128.1Transporter, CPA2 family; KEGG: sun:SUN_2183 1.3e-13 cation-translocating ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00. (438 aa)    
Predicted Functional Partners:
pepN-2
KEGG: rha:RHA1_ro01938 2.8e-140 membrane alanyl aminopeptidase K01256; Psort location: Cytoplasmic, score: 9.97.
       0.778
KWZ72125.1
Transcriptional regulator, MerR family; Psort location: Cytoplasmic, score: 7.50.
 
    0.707
KWZ72126.1
Oxoglutarate dehydrogenase inhibitor; KEGG: bde:BDP_0043 1.6e-09 FHA domain containing protein; Psort location: Cytoplasmic, score: 7.50.
       0.603
KWZ72129.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.555
KWZ72130.1
KEGG: bcv:Bcav_1962 4.9e-88 3'-5' exonuclease; K03684 ribonuclease D; Psort location: Cytoplasmic, score: 9.97.
       0.555
KWZ72133.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 2.7e-39 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.498
KWZ72124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.423
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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