STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72140.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. (215 aa)    
Predicted Functional Partners:
KWZ72141.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.947
KWZ72139.1
Nucleic acid-binding domain protein; KEGG: plt:Plut_0350 0.00018 ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 7.50.
 
     0.849
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.762
KWZ72672.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.736
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.732
KWZ72074.1
Hypothetical protein; KEGG: phu:Phum_PHUM098460 0.00011 myosin-9, putative K10352; Psort location: Cytoplasmic, score: 7.50.
  
     0.726
KWZ74109.1
Hypothetical protein.
  
     0.711
KWZ72548.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.706
KWZ72124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.647
KWZ74486.1
Hypothetical protein; KEGG: gpo:GPOL_c22560 0.00095 priA; primosomal protein N' K04066; Psort location: Cytoplasmic, score: 7.50.
  
     0.645
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.