STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72143.1KEGG: rsa:RSal33209_2410 1.0e-46 nucleotide pyrophosphatase; Psort location: Cytoplasmic, score: 7.50. (348 aa)    
Predicted Functional Partners:
KWZ74299.1
KEGG: scp:HMPREF0833_11161 4.5e-165 family 31 glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
    
  0.654
KWZ72144.1
DNA gyrase/topoisomerase IV, A subunit; KEGG: cfl:Cfla_1693 6.7e-242 DNA topoisomerase K02469; Psort location: Cytoplasmic, score: 9.97.
       0.636
KWZ72626.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.476
KWZ74931.1
Hypothetical protein.
  
     0.464
KWZ72672.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.436
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.421
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.