STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72161.1KEGG: mcu:HMPREF0573_11803 1.0e-42 fkbP; secreted peptidyl-prolyl cis-trans isomerase K01802; Psort location: CytoplasmicMembrane, score: 8.29. (316 aa)    
Predicted Functional Partners:
KWZ72162.1
KEGG: hiq:CGSHiGG_02350 1.7e-23 iron-sulfur cluster insertion protein ErpA K15724; Psort location: Cytoplasmic, score: 7.50; Belongs to the HesB/IscA family.
       0.719
KWZ75209.1
Aspartate kinase II; KEGG: mcu:HMPREF0573_10651 5.1e-157 ask; aspartate kinase K00928; Psort location: Cytoplasmic, score: 7.50; Belongs to the aspartokinase family.
    
   0.605
KWZ72163.1
Hypothetical protein; KEGG: srt:Srot_2267 1.7e-13 glycerate kinase K00865; Psort location: CytoplasmicMembrane, score: 8.16.
       0.601
KWZ72164.1
Peptidase dimerization domain protein; KEGG: iva:Isova_1838 1.2e-116 Beta-Ala-His dipeptidase; Psort location: Cytoplasmic, score: 7.50.
       0.601
KWZ75060.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: cgo:Corgl_1656 1.4e-76 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
    
   0.594
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
   0.583
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.580
KWZ72111.1
Putative ribosomal RNA small subunit methyltransferase B; KEGG: jde:Jden_1312 2.1e-105 Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.568
rplW
Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
   
   0.546
rplR
Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
   
   0.542
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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