STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717335_00153Unannotated protein. (522 aa)    
Predicted Functional Partners:
GCA_000717335_09237
Unannotated protein.
  
     0.763
GCA_000717335_07700
Unannotated protein.
  
     0.757
GCA_000717335_06959
Unannotated protein.
  
     0.741
GCA_000717335_09106
Unannotated protein.
  
     0.720
GCA_000717335_04544
Unannotated protein.
  
     0.672
GCA_000717335_05380
Unannotated protein.
  
     0.668
GCA_000717335_09125
Unannotated protein.
  
     0.654
GCA_000717335_00151
Unannotated protein.
       0.620
GCA_000717335_00152
Unannotated protein.
       0.620
GCA_000717335_01729
Unannotated protein.
  
     0.602
Your Current Organism:
Amycolatopsis jejuensis
NCBI taxonomy Id: 330084
Other names: A. jejuensis, Amycolatopsis jejuensis Lee 2006, JCM 13280, NRRL B-24427, strain N7-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.