STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717335_00204Unannotated protein. (601 aa)    
Predicted Functional Partners:
GCA_000717335_00203
Unannotated protein.
       0.773
GCA_000717335_01271
Unannotated protein.
    
 
 0.769
GCA_000717335_09157
Unannotated protein.
  
     0.761
GCA_000717335_01085
Unannotated protein.
   
   0.746
GCA_000717335_08323
Unannotated protein.
  
 
   0.739
GCA_000717335_03992
Unannotated protein.
   
  0.737
GCA_000717335_01084
Unannotated protein.
   
   0.725
GCA_000717335_03994
Unannotated protein.
   
   0.711
GCA_000717335_02681
Unannotated protein.
    
 
 0.707
GCA_000717335_01083
Unannotated protein.
   
   0.704
Your Current Organism:
Amycolatopsis jejuensis
NCBI taxonomy Id: 330084
Other names: A. jejuensis, Amycolatopsis jejuensis Lee 2006, JCM 13280, NRRL B-24427, strain N7-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.