STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717335_03010Unannotated protein. (230 aa)    
Predicted Functional Partners:
GCA_000717335_03012
Unannotated protein.
 
 0.838
GCA_000717335_03011
Unannotated protein.
 
    
0.820
GCA_000717335_08611
Unannotated protein.
  
  0.646
GCA_000717335_02676
Unannotated protein.
  
  0.618
GCA_000717335_05899
Unannotated protein.
 
 0.594
GCA_000717335_03723
Unannotated protein.
  
 0.584
GCA_000717335_08118
Unannotated protein.
 
    0.576
GCA_000717335_04153
Unannotated protein.
 
    0.549
GCA_000717335_08874
Unannotated protein.
 
    0.543
GCA_000717335_02890
Unannotated protein.
  
 0.542
Your Current Organism:
Amycolatopsis jejuensis
NCBI taxonomy Id: 330084
Other names: A. jejuensis, Amycolatopsis jejuensis Lee 2006, JCM 13280, NRRL B-24427, strain N7-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.