STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717335_03365Unannotated protein. (491 aa)    
Predicted Functional Partners:
GCA_000717335_07844
Unannotated protein.
  
 
 0.924
GCA_000717335_03364
Unannotated protein.
 
     0.822
GCA_000717335_03363
Unannotated protein.
 
     0.769
GCA_000717335_04732
Unannotated protein.
  
 
 0.763
GCA_000717335_05529
Unannotated protein.
  
 
 0.740
GCA_000717335_04733
Unannotated protein.
  
 
 0.739
GCA_000717335_08292
Unannotated protein.
    
   0.714
GCA_000717335_01591
Unannotated protein.
  
 0.678
GCA_000717335_02155
Unannotated protein.
  
 0.678
GCA_000717335_02745
Unannotated protein.
  
 0.678
Your Current Organism:
Amycolatopsis jejuensis
NCBI taxonomy Id: 330084
Other names: A. jejuensis, Amycolatopsis jejuensis Lee 2006, JCM 13280, NRRL B-24427, strain N7-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.