STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717335_05078Unannotated protein. (861 aa)    
Predicted Functional Partners:
GCA_000717335_07335
Unannotated protein.
  
 0.991
GCA_000717335_06114
Unannotated protein.
 
  
 0.987
GCA_000717335_08146
Unannotated protein.
 
   
 0.931
GCA_000717335_07334
Unannotated protein.
 
 
 0.926
GCA_000717335_03344
Unannotated protein.
   
  
 0.915
GCA_000717335_07343
Unannotated protein.
  
  
 0.899
GCA_000717335_07332
Unannotated protein.
  
  
 0.895
GCA_000717335_06113
Unannotated protein.
 
   
 0.847
GCA_000717335_06309
Unannotated protein.
  
    0.841
GCA_000717335_03596
Unannotated protein.
  
    0.778
Your Current Organism:
Amycolatopsis jejuensis
NCBI taxonomy Id: 330084
Other names: A. jejuensis, Amycolatopsis jejuensis Lee 2006, JCM 13280, NRRL B-24427, strain N7-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.