STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717335_06933Unannotated protein. (107 aa)    
Predicted Functional Partners:
GCA_000717335_06932
Unannotated protein.
       0.773
GCA_000717335_06934
Unannotated protein.
       0.752
GCA_000717335_06935
Unannotated protein.
       0.752
GCA_000717335_06936
Unannotated protein.
       0.502
GCA_000717335_06937
Unannotated protein.
       0.502
GCA_000717335_06938
Unannotated protein.
       0.502
GCA_000717335_06939
Unannotated protein.
       0.468
GCA_000717335_06940
Unannotated protein.
       0.408
GCA_000717335_06941
Unannotated protein.
       0.408
GCA_000717335_06942
Unannotated protein.
       0.408
Your Current Organism:
Amycolatopsis jejuensis
NCBI taxonomy Id: 330084
Other names: A. jejuensis, Amycolatopsis jejuensis Lee 2006, JCM 13280, NRRL B-24427, strain N7-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.