STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717335_07944Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_000717335_07943
Unannotated protein.
 
     0.968
GCA_000717335_07945
Unannotated protein.
 
     0.961
GCA_000717335_07941
Unannotated protein.
 
     0.927
GCA_000717335_07942
Unannotated protein.
 
     0.812
GCA_000717335_08021
Unannotated protein.
  
     0.766
GCA_000717335_08617
Unannotated protein.
  
     0.764
GCA_000717335_04809
Unannotated protein.
  
     0.750
GCA_000717335_05728
Unannotated protein.
  
     0.737
GCA_000717335_08068
Unannotated protein.
  
     0.734
GCA_000717335_08249
Unannotated protein.
  
     0.710
Your Current Organism:
Amycolatopsis jejuensis
NCBI taxonomy Id: 330084
Other names: A. jejuensis, Amycolatopsis jejuensis Lee 2006, JCM 13280, NRRL B-24427, strain N7-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.