Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOG27317.1 | AOG27319.1 | BFS79_00770 | BFS79_00780 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.862 |
| AOG27317.1 | AOG27320.1 | BFS79_00770 | BFS79_00785 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.853 |
| AOG27317.1 | atpA | BFS79_00770 | BFS79_00820 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.520 |
| AOG27317.1 | atpC | BFS79_00770 | BFS79_00835 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.406 |
| AOG27317.1 | atpD | BFS79_00770 | BFS79_00830 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.499 |
| AOG27317.1 | atpE | BFS79_00770 | BFS79_00805 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.522 |
| AOG27317.1 | atpG | BFS79_00770 | BFS79_00825 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.410 |
| AOG27317.1 | atpH | BFS79_00770 | BFS79_00815 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.543 |
| AOG27317.1 | prmC | BFS79_00770 | BFS79_00775 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.997 |
| AOG27317.1 | rpmE | BFS79_00770 | BFS79_00765 | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.939 |
| AOG27319.1 | AOG27317.1 | BFS79_00780 | BFS79_00770 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.862 |
| AOG27319.1 | AOG27320.1 | BFS79_00780 | BFS79_00785 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
| AOG27319.1 | atpA | BFS79_00780 | BFS79_00820 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.410 |
| AOG27319.1 | atpC | BFS79_00780 | BFS79_00835 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | ATP synthase F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.411 |
| AOG27319.1 | atpD | BFS79_00780 | BFS79_00830 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.406 |
| AOG27319.1 | atpE | BFS79_00780 | BFS79_00805 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | ATP synthase F0 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.467 |
| AOG27319.1 | atpG | BFS79_00780 | BFS79_00825 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.431 |
| AOG27319.1 | atpH | BFS79_00780 | BFS79_00815 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.447 |
| AOG27319.1 | prmC | BFS79_00780 | BFS79_00775 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.969 |
| AOG27319.1 | rpmE | BFS79_00780 | BFS79_00765 | threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.628 |
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