STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG27700.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
AOG27605.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
       0.537
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
     0.518
AOG27236.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
AOG27686.1
Cell division protein FtsQ; Essential cell division protein.
 
     0.497
AOG28864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
AOG28665.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
gcvH
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.444
AOG27423.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
AOG28135.1
Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
Your Current Organism:
Cutibacterium avidum
NCBI taxonomy Id: 33010
Other names: ATCC 25577, Bacteroides avidus, C. avidum, CCUG 36754, CIP 103261, Corynebacterium avidum, DSM 4901, IFO 15671, Mycobacterium avidum, NBRC 15671, NCTC 11864, Propionibacterium avidum, Propionicibacterium avidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.