STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG28000.1PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)    
Predicted Functional Partners:
AOG28001.1
PTS galactitol transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
AOG29295.1
PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.940
AOG28218.1
Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.913
AOG29299.1
PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.902
AOG28025.1
Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.902
AOG28003.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.853
AOG28385.1
PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.829
AOG28299.1
PTS galactitol transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.827
AOG28300.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.808
AOG29358.1
PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
Your Current Organism:
Cutibacterium avidum
NCBI taxonomy Id: 33010
Other names: ATCC 25577, Bacteroides avidus, C. avidum, CCUG 36754, CIP 103261, Corynebacterium avidum, DSM 4901, IFO 15671, Mycobacterium avidum, NBRC 15671, NCTC 11864, Propionibacterium avidum, Propionicibacterium avidum
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.