STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG28266.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1040 aa)    
Predicted Functional Partners:
AOG29095.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.910
AOG28267.1
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.857
AOG28263.1
Metal-independent alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.847
AOG28265.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.813
AOG28268.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.794
AOG28264.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.787
AOG29041.1
endo-beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.682
AOG29290.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.638
AOG29094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.563
AOG29099.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.553
Your Current Organism:
Cutibacterium avidum
NCBI taxonomy Id: 33010
Other names: ATCC 25577, Bacteroides avidus, C. avidum, CCUG 36754, CIP 103261, Corynebacterium avidum, DSM 4901, IFO 15671, Mycobacterium avidum, NBRC 15671, NCTC 11864, Propionibacterium avidum, Propionicibacterium avidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.