STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG28976.1GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)    
Predicted Functional Partners:
AOG28708.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.758
AOG27226.1
Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.681
AOG27606.1
Competence protein ComE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.644
AOG27528.1
Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.630
AOG28050.1
RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.615
AOG28276.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.599
AOG28977.1
Ribose-5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.570
AOG29029.1
Enoyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.557
AOG29001.1
Cytochrome oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
AOG27355.1
UbiD family decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
Your Current Organism:
Cutibacterium avidum
NCBI taxonomy Id: 33010
Other names: ATCC 25577, Bacteroides avidus, C. avidum, CCUG 36754, CIP 103261, Corynebacterium avidum, DSM 4901, IFO 15671, Mycobacterium avidum, NBRC 15671, NCTC 11864, Propionibacterium avidum, Propionicibacterium avidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.