Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOG29056.1Anchored repeat ABC transporter, substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (508 aa)    
Predicted Functional Partners:
AOG29054.1
Anchored repeat-type ABC transporter ATP-binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
AOG29053.1
Anchored repeat-type ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
AOG29055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
AOG29057.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.857
AOG28457.1
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
AOG28458.1
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.831
AOG28459.1
Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.777
AOG28737.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.776
AOG27867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.738
AOG28738.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.691
Your Current Organism:
Cutibacterium avidum
NCBI taxonomy Id: 33010
Other names: ATCC 25577, Bacteroides avidus, C. avidum, CCUG 36754, CIP 103261, Corynebacterium avidum, DSM 4901, IFO 15671, Mycobacterium avidum, NBRC 15671, NCTC 11864, Propionibacterium avidum, Propionicibacterium avidum
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