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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0025Putative NADH-flavin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (213 aa)    
Predicted Functional Partners:
ndh
Respiratory NADH dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.885
yfcH
Conserved protein of unknown function, NAD(P)-binding Rossmann-fold domain; Homologs of previously reported genes of unknown function.
   
    0.674
NIDE0024
Exported protein of unknown function; No homology to any previously reported sequences.
       0.645
NIDE3480
Putative 3-demethylubiquinone-9 3-O-methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.560
xylB
Aryl-alcohol dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.543
flgC
Flagellar basal-body rod protein FlgC; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.
    
   0.540
NIDE0009
Conserved protein of unknown function, NmrA-like; Homologs of previously reported genes of unknown function; 12764138.
 
    0.533
NIDE2132
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.480
NIDE3697
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
  
 0.480
NIDE1901
Putative Type I restriction system, restriction protein HsdR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.437
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.