Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE0025Putative NADH-flavin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (213 aa)    
Predicted Functional Partners:
ndh
Respiratory NADH dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.890
NIDE0024
Exported protein of unknown function; No homology to any previously reported sequences.
       0.645
xylB
Aryl-alcohol dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.543
flgC
Flagellar basal-body rod protein FlgC; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.
    
   0.470
pchF
4-cresol dehydrogenase (hydroxylating), flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.428
NIDE3623
Putative 2,5-diketo-D-gluconic acid reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.422
NIDE0021
Homologs of previously reported genes of unknown function.
       0.403
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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