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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0099Conserved protein of unknown function (phage related); Homologs of previously reported genes of unknown function; extrachromosomal origin. (178 aa)    
Predicted Functional Partners:
NIDE0100
Phage terminase, large subunit; Function of strongly homologous gene; extrachromosomal origin.
 
     0.952
NIDE0104
Phage portal protein, lambda family; Function of strongly homologous gene; extrachromosomal origin.
 
     0.941
NIDE0107
Conserved protein of unknown function (phage related); Homologs of previously reported genes of unknown function.
 
     0.938
NIDE0106
Conserved protein of unknown function (phage related); Homologs of previously reported genes of unknown function.
 
     0.935
NIDE0105
Putative Phage minor capsid protein C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
     0.900
NIDE0097
Homologs of previously reported genes of unknown function.
 
     0.873
NIDE0122
Homologs of previously reported genes of unknown function.
 
     0.827
NIDE0114
Putative Phage tail length tape measure protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
     0.795
NIDE0092
Site-specific DNA-methyltransferase N-4/N-6 (phage related); Function of strongly homologous gene; enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.791
NIDE0121
Homologs of previously reported genes of unknown function.
 
     0.786
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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