STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NIDE0209Putative Glucose/ribitol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (256 aa)    
Predicted Functional Partners:
NIDE0208
Homologs of previously reported genes of unknown function.
 
  
 0.947
NIDE0210
Putative Flavin-containing amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.934
NIDE0211
Conserved protein of unknown function, DUF1365; Homologs of previously reported genes of unknown function.
 
  
 0.929
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.903
NIDE0213
Homologs of previously reported genes of unknown function.
 
   
 0.851
fabG5
3-oxoacyl-(acyl-carrier-protein) reductase; Function of strongly homologous gene; enzyme.
  
 
 
 0.718
NIDE0207
Homologs of previously reported genes of unknown function.
 
     0.648
NIDE1742
Putative Multi-domain non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.600
NIDE2131
Putative 3-oxoacyl-(acyl-carrier-protein) reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 
 0.561
NIDE2150
Putative Multi-domain non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.433
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.