STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE0210Putative Flavin-containing amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (419 aa)    
Predicted Functional Partners:
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.995
NIDE0211
Conserved protein of unknown function, DUF1365; Homologs of previously reported genes of unknown function.
  
 0.994
NIDE4372
Conserved membrane protein of unknown function DUF1295; Homologs of previously reported genes of unknown function.
    0.948
NIDE0208
Homologs of previously reported genes of unknown function.
 
   
 0.940
NIDE0209
Putative Glucose/ribitol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.934
NIDE0213
Homologs of previously reported genes of unknown function.
 
   
 0.920
NIDE0207
Homologs of previously reported genes of unknown function.
 
     0.674
phr
Deoxyribodipyrimidine photolyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DNA photolyase family.
 
   
 0.621
NIDE3684
Conserved protein of unknown function, possible Anti-sigma-K factor; Homologs of previously reported genes of unknown function; 9573603.
  
  
 0.441
NIDE0204
Homologs of previously reported genes of unknown function.
       0.432
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.